CDS

Accession Number TCMCG016C25141
gbkey CDS
Protein Id OMO56353.1
Location join(1737..1781,1892..1997,2619..2757,3078..3186,3283..3391,3547..3654,3864..3970,4428..4555,4759..4788,5680..5734,6173..6215,6294..6304)
Organism Corchorus capsularis
locus_tag CCACVL1_26610

Protein

Length 329aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014511.1
Definition tRNA-dihydrouridine synthase [Corchorus capsularis]
Locus_tag CCACVL1_26610

EGGNOG-MAPPER Annotation

COG_category J
Description Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K05543        [VIEW IN KEGG]
EC 1.3.1.91        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001932        [VIEW IN EMBL-EBI]
GO:0001933        [VIEW IN EMBL-EBI]
GO:0002943        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003725        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004857        [VIEW IN EMBL-EBI]
GO:0004860        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006469        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010563        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0017150        [VIEW IN EMBL-EBI]
GO:0019207        [VIEW IN EMBL-EBI]
GO:0019210        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019887        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0033673        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042325        [VIEW IN EMBL-EBI]
GO:0042326        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043549        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045859        [VIEW IN EMBL-EBI]
GO:0045936        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051348        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGTACGAGAACAAGCTGGTTCTCGCTCCCATGGTTCGAATCGGAACGCTGCCATTTAGATTACTAGCTGCTGATTACGGTGCAGATATTACATATGTAGAGGAAATTATTGATCACAAATTACTCAAATGTGAGCGCATAGTTAATGAATATATTGGGTCAACTGATTTTGTTGAGAAGGGGACTGGTAATGTTGTCTTTAGAACCTGCAATGAAGAAAGGAACCGGGTGGTACTTCAGATGGGCACTTCTGATGCTGTGAGGGCTCTAAAGACTGCTCAGATGGTGTCTAAAGATGTTGCTGCAGTGGATATAAATATGGGTTGCCCCAAGTCATTTTCTGTTAGTGGGGGCATGGGTGCTGCTTTGTTGACGAAGCCTGATCTCATACATGATATTTTGACAACTTTAAGGAGGAATCTGGACATACCAGTAACATGCAAGATCCGACTTCTAAAATCACCGCAAGATACAGTAGAACTTGCAAGGAGAATTGAGAAAACTGCAAAGTGGAATGAAATTGCTGATGTTGTATCAGCATTATCAATTCCAGTTATTGCAAATGGTGATGTTTTTGAATATGATGATTTTCAACGCATTAAAGCTGCTACAGGCGCTTCATCTGTTATGGTTGCAAGAGGTGCTATGTGGAATGCTTCAATTTTCTCTCCCAAAGGTAAATCTCATTGGGAGGATGTGAAAAGAGAGTATGTTAGGAAGAGCATATTATGGGATAATGATGTAAAAAGCACAAAGCACACATTAAAGGAGATGATAATGCATTTCTCCTGCCTTGAATTCCCAGAGGGAAAAGCTGTGATCAAGTCAGAAAATTTGGCAGATCTAGCGAAAGTTTACGGGGAGGAAGAGTATTATCGGGCGTTTACTTCCCTACCGAGGCTTACCCTTACTGATCCGCTCCTCCGCAAATCCGAATCGTTTTCACTCCTACTTTACACGCCGAAGCTTAAGATTGGTCTTTCTTAA
Protein:  
MEYENKLVLAPMVRIGTLPFRLLAADYGADITYVEEIIDHKLLKCERIVNEYIGSTDFVEKGTGNVVFRTCNEERNRVVLQMGTSDAVRALKTAQMVSKDVAAVDINMGCPKSFSVSGGMGAALLTKPDLIHDILTTLRRNLDIPVTCKIRLLKSPQDTVELARRIEKTAKWNEIADVVSALSIPVIANGDVFEYDDFQRIKAATGASSVMVARGAMWNASIFSPKGKSHWEDVKREYVRKSILWDNDVKSTKHTLKEMIMHFSCLEFPEGKAVIKSENLADLAKVYGEEEYYRAFTSLPRLTLTDPLLRKSESFSLLLYTPKLKIGLS